Chemical Genomics Research Group
Group Director
Minoru Yoshida

- Brief resume
- 1986
- Ph.D., University of Tokyo
- 1986
- Assistant Professor, University of Tokyo
- 1995
- Associate Professor, University of Tokyo
- 2002
- Chief Scientist, Chemical Genetics Laboratory, RIKEN (-current)
- 2002
- Visiting Professor, University of Tokyo (-current)
- 2003
- Visiting Professor, Saitama University (-current)
- 2008
- Group Director, Chemical Genomics Research Group, RIKEN (-current)
- 2011
- Visiting Professor, Kyoto University (-current)
Outline
Chemical biology using chemistry as leverage has unraveled complex biological functions and contributed much to the discovery of novel phenomena and their underlying mechanisms. Thanks to recent technical advances, chemical biology has been able to develop a more comprehensive approach to “Chemical Genomics.” Our group focuses on the development of a variety of original assay systems using newly identified genes, proteins and cell lines, and on the discovery of unique compounds (molecular ligands) that target specific biological molecules. Based on the activity of such novel molecular ligands, our efforts will be directed toward the identification of their target molecules and the elucidation of the roles of their biological functions. Our goal is to more deeply understand biological systems and to construct the bases for drug discovery.
Selected Publications
- S. Nishimura, et al. Marine antifungal theonellamides target 3beta-hydroxysterol to activate Rho1 signaling, Nat. Chem. Biol. 2010, 6, 519.
- T. Maekawa, W. Jin, S. Ishii, The role of ATF-2 family transcription factors in adipocyte differentiation: antiobesity effects of p38 inhibitors, Mol. Cell. Biol. 2010, 30, 613.
- M. Ohkubo, G. Hirai, M. Sodeoka, Synthesis of the DFGH ring system of Type B Physalins: Highly Oxygenated, Cage-Shaped Molecules, Angew. Chem. Int. Ed. 2009, 48, 3862.
- K. Sasaki, T. Ito, N. Nishino, S. Khochbin, M. Yoshida, Real-time imaging of histone H4 hyperacetylation in living cells, Proc. Natl Acad. Sci. USA 2009, 106, 16257.
- C. H. Ho, et al. A molecular barcoded yeast ORF library enables mode-of-action analysis of bioactive compounds, Nature Biotechnol. 2009, 27, 369.
- T. Watanabe, et al. Genetic analysis of glucosidase II β-subunit in trimming of high-mannose-type glycans, Glycobiology 2009, 19, 834.
- I. Fukuda, et al. Kerriamycin B inhibits protein SUMOylation, J. Antibiotics, 2009, 62, 221.
- H. Tatsukawa, et al. Role of transglutaminase 2 in liver injury via crosslinking and silencing of transcription factor, Sp1, Gastroenterology, 2009, 136, 1783.
- I. Fukuda, et al. Ginkgolic acid inhibits protein SUMOylation by blocking formation of the E1-SUMO intermediate, Chem. Biol. 2009, 16, 133.
- Y. Yashiroda, A. Matsuyama, M. Yoshida, New insights into chemical biology from ORFeome libraries, Curr. Opin. Chem. Biol. 2008, 12, 55.
Research Teams
- Team Leader
- Minoru Yoshida
Our team focuses on the development of useful molecular ligands that are expected to contribute to advances in the life sciences by employing chemical libraries.
- Team Leader
- Mikiko Sodeoka
Our team focuses on the development of novel types of ligand molecules, which interact with proteins involved in post-translational modification, such as protein phosphorylation, glycosylation, methylation and acetylation, based on synthetic organic chemistry.
- Team Leader
- Charles M. Boone
Our team aims at developing innovative techniques based on global analysis of yeast genetic interaction and physical interaction using mass spectrometry, which leads to quick and accurate detection of the ligand-target interactions.
- Team Leader
- Soichi Kojima
Our team aims to provide unique screening systems and establish novel biological principles to create foundations for new drug discovery.
Core Members
| Principal Investigator |
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| Minoru Yoshida |
Group Director |
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| Staff Scientist |
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| Student Trainee |
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| Technical Assistant |
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| Administrative Assistant |
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| Visiting Research Staff |
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( ) indicates primary affiliation in RIKEN. Please see Research Team page for other members.